Class FlushedCache
- java.lang.Object
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- edu.isi.pegasus.planner.catalog.replica.impl.FlushedCache
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- All Implemented Interfaces:
Catalog
,ReplicaCatalog
public class FlushedCache extends java.lang.Object implements ReplicaCatalog
This class implements a replica catalog which directly writes to the output file. This is done so that the Cache file generation would not require storing all RC entries in memory. The implementation does not maintain any internal state, and is not aware if same entries are being written multiple times. The class using this implementation needs to ensure only valid entries are passed through to the insert method, and that entries are not being duplicated.- Version:
- $Revision: 5907 $
- Author:
- Rajiv Mayani
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Field Summary
Fields Modifier and Type Field Description private static int
m_avg_line_size
No.private int
m_buffer_size
No.private int
m_line_count
No.protected java.io.BufferedWriter
m_out
A buffered writer, to buffer all file writes being performed.-
Fields inherited from interface edu.isi.pegasus.planner.catalog.Catalog
DB_ALL_PREFIX
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Fields inherited from interface edu.isi.pegasus.planner.catalog.ReplicaCatalog
BATCH_KEY, c_prefix, DB_PREFIX, PROXY_KEY
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Constructor Summary
Constructors Constructor Description FlushedCache()
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description int
clear()
Removes everything.void
close()
This operation will dump the in-memory representation back onto disk.boolean
connect(java.lang.String filename)
Opens the file for writing.boolean
connect(java.util.Properties props)
Establishes a connection to the database from the properties.int
delete(java.lang.String lfn, ReplicaCatalogEntry tuple)
Deletes a very specific mapping from the replica catalog.int
delete(java.lang.String lfn, java.lang.String pfn)
Deletes a specific mapping from the replica catalog.int
delete(java.lang.String lfn, java.lang.String name, java.lang.Object value)
Deletes all PFN entries for a given LFN from the replica catalog where the PFN attribute is found, and matches exactly the object value.int
delete(java.util.Map x, boolean matchAttributes)
Deletes multiple mappings into the replica catalog.int
deleteByResource(java.lang.String lfn, java.lang.String handle)
Deletes all PFN entries for a given LFN from the replica catalog where the resource handle is found.private void
flush()
Check if the buffer is full i.e.int
insert(java.lang.String lfn, ReplicaCatalogEntry tuple)
Inserts a new mapping into the replica catalog.int
insert(java.lang.String lfn, java.lang.String pfn, java.lang.String handle)
Inserts a new mapping into the replica catalog.int
insert(java.util.Map x)
Inserts multiple mappings into the replica catalog.boolean
isClosed()
Predicate to check, if the connection with the catalog's implementation is still active.java.util.Set
list()
Lists all logical filenames in the catalog.java.util.Set
list(java.lang.String constraint)
Lists a subset of all logical filenames in the catalog.java.util.Collection
lookup(java.lang.String lfn)
Retrieves all entries for a given LFN from the replica catalog.java.lang.String
lookup(java.lang.String lfn, java.lang.String handle)
Retrieves the entry for a given filename and resource handle from the replica catalog.java.util.Map
lookup(java.util.Map constraints)
Retrieves multiple entries for a given logical filename, up to the complete catalog.java.util.Map
lookup(java.util.Set lfns)
Retrieves multiple entries for a given logical filename, up to the complete catalog.java.util.Map
lookup(java.util.Set lfns, java.lang.String handle)
Retrieves multiple entries for a given logical filename, up to the complete catalog.java.util.Set
lookupNoAttributes(java.lang.String lfn)
Retrieves all entries for a given LFN from the replica catalog.java.util.Map
lookupNoAttributes(java.util.Set lfns)
Retrieves multiple entries for a given logical filename, up to the complete catalog.java.util.Map
lookupNoAttributes(java.util.Set lfns, java.lang.String handle)
Retrieves multiple entries for a given logical filename, up to the complete catalog.java.lang.String
quote(Escape e, java.lang.String s)
Quotes a string only if necessary.int
remove(java.lang.String lfn)
Removes all mappings for an LFN from the replica catalog.int
remove(java.util.Set lfns)
Removes all mappings for a set of LFNs.int
removeByAttribute(java.lang.String handle)
Removes all entries associated with a particular resource handle.int
removeByAttribute(java.lang.String name, java.lang.Object value)
Removes all entries from the replica catalog where the PFN attribute is found, and matches exactly the object value.void
setBufferSize(int bufferSize)
Set buffer size i.e.private void
write(java.lang.String content)
protected java.lang.String
writeReplicaCatalogEntry(java.lang.String lfn, ReplicaCatalogEntry rce)
The method generate a String representation of the replica catalog entry.
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Field Detail
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m_out
protected java.io.BufferedWriter m_out
A buffered writer, to buffer all file writes being performed.
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m_buffer_size
private int m_buffer_size
No. of entries to buffer.
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m_avg_line_size
private static final int m_avg_line_size
No. of entries to buffer.- See Also:
- Constant Field Values
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m_line_count
private int m_line_count
No. of un-flushed entries.
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Method Detail
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setBufferSize
public void setBufferSize(int bufferSize)
Set buffer size i.e. The no of lines that the implementation will buffer.
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connect
public boolean connect(java.lang.String filename)
Opens the file for writing.- Parameters:
filename
- is the name of the file to write too.- Returns:
- true, if the file can be opened for writing
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connect
public boolean connect(java.util.Properties props)
Establishes a connection to the database from the properties. You will need to specify a "file" property to point to the location of the on-disk instance.
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quote
public java.lang.String quote(Escape e, java.lang.String s)
Quotes a string only if necessary. This methods first determines, if a strings requires quoting, because it contains whitespace, an equality sign, quotes, or a backslash. If not, the string is not quoted. If the input contains forbidden characters, it is placed into quotes and quote and backslash are backslash escaped.However, if the property "quote" had a
true
value when connecting to the database, output will always be quoted.- Parameters:
e
- is the Escape instance used to escape strings.s
- is the string that may require quoting- Returns:
- either the original string, or a newly allocated instance to an escaped string.
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writeReplicaCatalogEntry
protected java.lang.String writeReplicaCatalogEntry(java.lang.String lfn, ReplicaCatalogEntry rce)
The method generate a String representation of the replica catalog entry. The String representation follows the format expected by SimpleFile replica catalog implementation.- Parameters:
lfn
- The logical file namerce
- The replica catalog entry consisting of the physical file name name and key, value pairs.- Returns:
- A String representation of the replica-catalog entry.
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flush
private void flush()
Check if the buffer is full i.e. No. of unwritten lines is same as m_buffer_size- See Also:
setBufferSize(int)
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close
public void close()
This operation will dump the in-memory representation back onto disk. The store operation is strict in what it produces. The LFN and PFN records are only quoted, if they require quotes, because they contain special characters. The attributes are always quoted and thus quote-escaped.
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isClosed
public boolean isClosed()
Predicate to check, if the connection with the catalog's implementation is still active. This helps determining, if it makes sense to callclose()
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lookup
public java.lang.String lookup(java.lang.String lfn, java.lang.String handle)
Description copied from interface:ReplicaCatalog
Retrieves the entry for a given filename and resource handle from the replica catalog.- Specified by:
lookup
in interfaceReplicaCatalog
- Parameters:
lfn
- is the logical filename to obtain information for.handle
- is the resource handle to obtain entries for.- Returns:
- the (first) matching physical filename, or
null
if no match was found.
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lookup
public java.util.Collection lookup(java.lang.String lfn)
Description copied from interface:ReplicaCatalog
Retrieves all entries for a given LFN from the replica catalog. Each entry in the result set is a tuple of a PFN and all its attributes.- Specified by:
lookup
in interfaceReplicaCatalog
- Parameters:
lfn
- is the logical filename to obtain information for.- Returns:
- a collection of replica catalog entries
- See Also:
ReplicaCatalogEntry
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lookupNoAttributes
public java.util.Set lookupNoAttributes(java.lang.String lfn)
Description copied from interface:ReplicaCatalog
Retrieves all entries for a given LFN from the replica catalog. Each entry in the result set is just a PFN string. Duplicates are reduced through the set paradigm.- Specified by:
lookupNoAttributes
in interfaceReplicaCatalog
- Parameters:
lfn
- is the logical filename to obtain information for.- Returns:
- a set of PFN strings
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lookup
public java.util.Map lookup(java.util.Set lfns)
Description copied from interface:ReplicaCatalog
Retrieves multiple entries for a given logical filename, up to the complete catalog. Retrieving full catalogs should be harmful, but may be helpful in an online display or portal.- Specified by:
lookup
in interfaceReplicaCatalog
- Parameters:
lfns
- is a set of logical filename strings to look up.- Returns:
- a map indexed by the LFN. Each value is a collection of replica catalog entries for the LFN.
- See Also:
ReplicaCatalogEntry
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lookupNoAttributes
public java.util.Map lookupNoAttributes(java.util.Set lfns)
Description copied from interface:ReplicaCatalog
Retrieves multiple entries for a given logical filename, up to the complete catalog. Retrieving full catalogs should be harmful, but may be helpful in an online display or portal.- Specified by:
lookupNoAttributes
in interfaceReplicaCatalog
- Parameters:
lfns
- is a set of logical filename strings to look up.- Returns:
- a map indexed by the LFN. Each value is a set of PFN strings.
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lookup
public java.util.Map lookup(java.util.Set lfns, java.lang.String handle)
Description copied from interface:ReplicaCatalog
Retrieves multiple entries for a given logical filename, up to the complete catalog. Retrieving full catalogs should be harmful, but may be helpful in online display or portal.- Specified by:
lookup
in interfaceReplicaCatalog
- Parameters:
lfns
- is a set of logical filename strings to look up.handle
- is the resource handle, restricting the LFNs.- Returns:
- a map indexed by the LFN. Each value is a collection of replica catalog entries (all attributes).
- See Also:
ReplicaCatalogEntry
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lookupNoAttributes
public java.util.Map lookupNoAttributes(java.util.Set lfns, java.lang.String handle)
Description copied from interface:ReplicaCatalog
Retrieves multiple entries for a given logical filename, up to the complete catalog. Retrieving full catalogs should be harmful, but may be helpful in online display or portal.- Specified by:
lookupNoAttributes
in interfaceReplicaCatalog
- Parameters:
lfns
- is a set of logical filename strings to look up.handle
- is the resource handle, restricting the LFNs.- Returns:
- a map indexed by the LFN. Each value is a set of physical filenames.
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lookup
public java.util.Map lookup(java.util.Map constraints)
Description copied from interface:ReplicaCatalog
Retrieves multiple entries for a given logical filename, up to the complete catalog. Retrieving full catalogs should be harmful, but may be helpful in online display or portal.- Specified by:
lookup
in interfaceReplicaCatalog
- Parameters:
constraints
- is mapping of keys 'lfn', 'pfn', or any attribute name, e.g. the resource handle 'site', to a string that has some meaning to the implementing system. This can be a SQL wildcard for queries, or a regular expression for Java-based memory collections. Unknown keys are ignored. Using an empty map requests the complete catalog.- Returns:
- a map indexed by the LFN. Each value is a collection of replica catalog entries.
- See Also:
ReplicaCatalogEntry
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list
public java.util.Set list()
Description copied from interface:ReplicaCatalog
Lists all logical filenames in the catalog.- Specified by:
list
in interfaceReplicaCatalog
- Returns:
- A set of all logical filenames known to the catalog.
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list
public java.util.Set list(java.lang.String constraint)
Description copied from interface:ReplicaCatalog
Lists a subset of all logical filenames in the catalog.- Specified by:
list
in interfaceReplicaCatalog
- Parameters:
constraint
- is a constraint for the logical filename only. It is a string that has some meaning to the implementing system. This can be a SQL wildcard for queries, or a regular expression for Java-based memory collections.- Returns:
- A set of logical filenames that match. The set may be empty
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insert
public int insert(java.lang.String lfn, ReplicaCatalogEntry tuple)
Inserts a new mapping into the replica catalog. Any existing mapping of the same LFN, PFN, and HANDLE will be replaced, including all of its attributes.- Specified by:
insert
in interfaceReplicaCatalog
- Parameters:
lfn
- is the logical filename under which to book the entry.tuple
- is the physical filename and associated PFN attributes.- Returns:
- number of insertions, should always be 1. On failure, throw an exception, don't use zero.
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insert
public int insert(java.lang.String lfn, java.lang.String pfn, java.lang.String handle)
Inserts a new mapping into the replica catalog. This is a convenience function exposing the resource handle. Internally, theReplicaCatalogEntry
element will be constructed, and passed to the appropriate insert function.- Specified by:
insert
in interfaceReplicaCatalog
- Parameters:
lfn
- is the logical filename under which to book the entry.pfn
- is the physical filename associated with it.handle
- is a resource handle where the PFN resides.- Returns:
- number of insertions, should always be 1. On failure, throw an exception, don't use zero.
- See Also:
insert(String, ReplicaCatalogEntry )
,ReplicaCatalogEntry
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insert
public int insert(java.util.Map x)
Inserts multiple mappings into the replica catalog. The input is a map indexed by the LFN. The value for each LFN key is a collection of replica catalog entries. Note that this operation will not replace existing entries.- Specified by:
insert
in interfaceReplicaCatalog
- Parameters:
x
- is a map from logical filename string to list of replica catalog entries.- Returns:
- the number of insertions.
- See Also:
org.griphyn.common.catalog.ReplicaCatalogEntry
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write
private void write(java.lang.String content)
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delete
public int delete(java.lang.String lfn, java.lang.String pfn)
Description copied from interface:ReplicaCatalog
Deletes a specific mapping from the replica catalog. We don't care about the resource handle. More than one entry could theoretically be removed. Upon removal of an entry, all attributes associated with the PFN also evaporate (cascading deletion).- Specified by:
delete
in interfaceReplicaCatalog
- Parameters:
lfn
- is the logical filename in the tuple.pfn
- is the physical filename in the tuple.- Returns:
- the number of removed entries.
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delete
public int delete(java.util.Map x, boolean matchAttributes)
Description copied from interface:ReplicaCatalog
Deletes multiple mappings into the replica catalog. The input is a map indexed by the LFN. The value for each LFN key is a collection of replica catalog entries. On setting matchAttributes to false, all entries having matching lfn pfn mapping to an entry in the Map are deleted. However, upon removal of an entry, all attributes associated with the pfn also evaporate (cascaded deletion).- Specified by:
delete
in interfaceReplicaCatalog
- Parameters:
x
- is a map from logical filename string to list of replica catalog entries.matchAttributes
- whether mapping should be deleted only if all attributes match.- Returns:
- the number of deletions.
- See Also:
ReplicaCatalogEntry
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delete
public int delete(java.lang.String lfn, ReplicaCatalogEntry tuple)
Description copied from interface:ReplicaCatalog
Deletes a very specific mapping from the replica catalog. The LFN must be matches, the PFN, and all PFN attributes specified in the replica catalog entry. More than one entry could theoretically be removed. Upon removal of an entry, all attributes associated with the PFN also evaporate (cascading deletion).- Specified by:
delete
in interfaceReplicaCatalog
- Parameters:
lfn
- is the logical filename in the tuple.tuple
- is a description of the PFN and its attributes.- Returns:
- the number of removed entries, either 0 or 1.
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delete
public int delete(java.lang.String lfn, java.lang.String name, java.lang.Object value)
Description copied from interface:ReplicaCatalog
Deletes all PFN entries for a given LFN from the replica catalog where the PFN attribute is found, and matches exactly the object value. This method may be useful to remove all replica entries that have a certain MD5 sum associated with them. It may also be harmful overkill.- Specified by:
delete
in interfaceReplicaCatalog
- Parameters:
lfn
- is the logical filename to look for.name
- is the PFN attribute name to look for.value
- is an exact match of the attribute value to match.- Returns:
- the number of removed entries.
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deleteByResource
public int deleteByResource(java.lang.String lfn, java.lang.String handle)
Description copied from interface:ReplicaCatalog
Deletes all PFN entries for a given LFN from the replica catalog where the resource handle is found. Karan requested this convenience method, which can be coded likedelete( lfn, RESOURCE_HANDLE, handle )
- Specified by:
deleteByResource
in interfaceReplicaCatalog
- Parameters:
lfn
- is the logical filename to look for.handle
- is the resource handle- Returns:
- the number of entries removed.
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remove
public int remove(java.lang.String lfn)
Description copied from interface:ReplicaCatalog
Removes all mappings for an LFN from the replica catalog.- Specified by:
remove
in interfaceReplicaCatalog
- Parameters:
lfn
- is the logical filename to remove all mappings for.- Returns:
- the number of removed entries.
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remove
public int remove(java.util.Set lfns)
Description copied from interface:ReplicaCatalog
Removes all mappings for a set of LFNs.- Specified by:
remove
in interfaceReplicaCatalog
- Parameters:
lfns
- is a set of logical filename to remove all mappings for.- Returns:
- the number of removed entries.
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removeByAttribute
public int removeByAttribute(java.lang.String name, java.lang.Object value)
Description copied from interface:ReplicaCatalog
Removes all entries from the replica catalog where the PFN attribute is found, and matches exactly the object value.- Specified by:
removeByAttribute
in interfaceReplicaCatalog
- Parameters:
name
- is the PFN attribute name to look for.value
- is an exact match of the attribute value to match.- Returns:
- the number of removed entries.
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removeByAttribute
public int removeByAttribute(java.lang.String handle)
Description copied from interface:ReplicaCatalog
Removes all entries associated with a particular resource handle. This is useful, if a site goes offline. It is a convenience method, which calls the genericremoveByAttribute
method.- Specified by:
removeByAttribute
in interfaceReplicaCatalog
- Parameters:
handle
- is the site handle to remove all entries for.- Returns:
- the number of removed entries.
- See Also:
ReplicaCatalog.removeByAttribute( String, Object )
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clear
public int clear()
Description copied from interface:ReplicaCatalog
Removes everything. Use with caution!- Specified by:
clear
in interfaceReplicaCatalog
- Returns:
- the number of removed entries.
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